BiOnym

BiOnym is a domain-specific framework and an environment to compare high volumes of names between registries.

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Basic Service Information

Description: Basic Service Information

Field Value
Service Multimedia N/A
Service Name BiOnym
Service Options N/A
Service Provider Name D4Science.org
Service Symbol N/A
Service Tagline Online environment to support online and onsite courses.
Service URL https://bluebridge.d4science.org/explore
Target Users Software Developer, IT Manager, Data Manager, Scientist, e-infrastructure experts/representatives
User Base The service is widely used by the members of the following VREs:SDG-Indicator14.4.1,FrenchTropicalTunaAtlas,StockAssessment,ICCAT BFT-E,IOTC SS3,Bay of Bengale Large Marine Ecosystem Hilsa WG,CWP Secretariat,WECAFC-FIRMS,Global Record of Stocks and Fisheries (GRSF),GRSF Admin,Biodiversity Lab,ScalableDataMining,TabularDataLab,Tuna Atlas,SDG-Indicator14.4.1,TabularDataLab,StockAssessment,WECAFC-FIRMS,Aquaculture Atlas Generation,Protected Area Impact Maps,Vulnerable Marine Ecosystem (VME) DB,Global Record of Stocks and Fisheries (GRSF),GRSF Admin,Tuna Atlas,SDG-Indicator14.4.1,AnalyticsLab,Biodiversity Lab,FrenchTropicalTunaAtlas,RPrototypingLab,RStudioLab,ScalableDataMining,TabularDataLab,StockAssessment,Bionym,ICCAT BFT-E,IOTC SS3,Aquaculture Atlas Generation,Protected Area Impact Maps,SDI_Lab,Vulnerable Marine Ecosystem (VME) DB,Aquaculture Training Lab,InfraTraining,SIASPA - Strategic Investment Analysis and Scientific Planning/Alerting VRE,SustainableBlueEconomy,Blue Datathon,DRuMFISH,ICES_BNetworkAnalysis,ICES_DALSA - ICES Trainign Course on Data Limited Stock Assessment,ICES_DASC - ICES Training Course on Design and Analysis od Statistically Sound Catch Sampling Programmes,ICES_FIACO - ICES Trainign Course on Principles and Methods of broadband/wideband technologies: application to Fisheries Acoustics,ICES_FIACO2017 - ICES Trainign Course on Principles and Methods of broadband/wideband technologies: application to Fisheries Acoustics,ICES_AbundanceEstimationFromAcoustic - ICES Training Course: Introduction to abundance estimation from fisheries acoustic surveys,ICES_IntroStockAssessment - ICES Training Course: Introduction to Stock Assessment,ICES_IntroToREnv - ICES Training Course Introduction to the R Environment,ICES_LogbookData - ICES Trainign Course on VMS and EU logbook data,ICES_MSE - ICES Training Course: Introduction to Management Strategy Evaluation,ICES_MSY - ICES Training course on methods for setting proxy MSY reference points,ICES OnlineOceanography,ICES_SA - ICES Training Course on Stock Assessment Advanced,ICES_TCRE - ICES Training Course in the R Environment,ICES_TCSSM - ICES Training Course on Social Science Methods for Natural Scientists,Alieia VRE,Aquabiotech,ARDAG_Aquaculture,Ellinika Psaria VRE,Forkys VRE,GALAXIDI,iLKNAK_Aquaculture,KIMAGRO_Fishfarming,MARKELLOS_Aquaculture,Sinay,STRATOS_AQUACULTURES,Global Record of Stocks and Fisheries (GRSF),GRSF Admin
User Value a. Software Developers that need to reconcile lists and sets of names with spelling hierarchical errors. The framework offers a flexible set of algorithms to define a software-driven approach to compute lexical distances; b. IT Managers are provided with a cost-effective and performant solution where an online service is needed to compute similarities between lists and sets, and where IT decision support is needed based on computed similarities; c. Data Managers have a flexible solution when the need is to harmonize and standardize (reference) data, and face issues with spelling mistakes, different vocabularies and hierarchical mistakes. BiOnym can support and automate some of the steps to reconcile differences between taxonomies. d. Individual scientists are assisted in identifying the correct name(s) of individual or groups of species names on-line, with a flexible user interface where preferences can be set; e. e-infrastructure experts/representatives are supported in performing datasets linking and capturing the results in a formalized way as a computed distance between two sets, with information of the method(s) and weights applied as integral part of the computational results.
Service Classification Information

Description: Service Classification Information

Field Value
Required Services None
Service Category Data
Service Changelog N/A
Service Language English
Service Last Update April 2018
Service Life Cycle Status 5. Production
Service Place Europe
Service Sub Category Mining
Service TRL TRL 9. actual system proven in operational environment
Service Valid For Up to end of 2019.
Service Version 3
Service Support Information

Description: Service Support Information

Field Value
Service Feedback http://support.d4science.org
Service Helpdesk http://support.d4science.org
Service Order http://support.d4science.org
Service User Manual https://gcube.wiki.gcube-system.org/gcube/Taxon_Names_Reconciliation_Service
Service Contractual Information

Description: Service Contractual Information

Field Value
Service Funding This work has received support from the BlueBRIDGE Project (European Union's Horizon 2020 research and innovation programme, Grant agreement No 675680) and is operated by the D4Science Infrastructure (D4Science.org).
Service Level Agreement http://support.d4science.org
Service Price Free, subscription, membership to corporate customers
Terms Of Use https://bluebridge.d4science.org/terms-of-use
Service Operations Information

Description: Service Operations Information

Field Value
Decommissioning Procedure https://wiki.d4science.org/index.php?title=Procedure_Decommissioning_Procedure
Disaster Recovery Plan https://wiki.d4science.org/index.php?title=Procedure_Disaster_Recovery_Plan
Metrics And Statistics https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Accounting_Dashboard
Operations Documentation https://wiki.d4science.org/index.php?title=D4Science_Deployment_and_Operation
Service Accounting https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Accounting
Service Availability Hours https://wiki.d4science.org/index.php?title=Procedure_Service_Availability_Hours
Service Level 1 Support https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Incident_Management#1st_Line_Support
Service Level 1 Support Hours https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Incident_Management#Prioritization_and_Assignment
Service Level 2 Support https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Incident_Management#2nd_Line_Support
Service Level 2 Support Hours https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Incident_Management#Prioritization_and_Assignment
Service Level 3 Support https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Incident_Management#Management_Decision
Service Level 3 Support Hours https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Incident_Management#Prioritization_and_Assignment
Service Maintenance Window https://wiki.d4science.org/index.php?title=Procedure_Downtime_Declaration
Service Monitoring https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Monitoring
Service Owner D4Science.org
Service Performance Indicator

Description: Service Performance Indicator

Field Value
Notes Reported performance indicators are aggregated values starting from 1st of April, 2017. For more information please refer to https://wiki.d4science.org/index.php?title=Procedure_Infrastructure_Accounting_Dashboard
Service Availability 99.99%
Service Reliability 99.97%
Service Serviceability 100%
Service Users 32000
Additional Info
Field Value
system:type Service
Management Info
Field Value
Author Fabio Sinibaldi
Maintainer D4Science.org
Version 1
Last Updated 18 April 2018, 18:59 (CEST)
Created 18 April 2018, 18:59 (CEST)